關於「HISAT2 github」標籤，搜尋引擎有相關的訊息討論：

DaehwanKimLab/hisat2: Graph-based alignment - GitHub。

HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (whole-genome, transcriptome, and exome sequencing data) to a ...： 。

hisat - Fast spliced aligner with low memory requirements - GitHub。

Fast spliced aligner with low memory requirements. Contribute to DaehwanKimLab/hisat development by creating an account on GitHub.： 。

DaehwanKimLab / hisat-genotype Public - GitHub。

HISAT-genotype is a next-generation genomic analysis software platform capable of assembling and genotyping human genes and genomic regions. Thie software ...： 。

Releases · DaehwanKimLab/hisat2 - GitHub。

Graph-based alignment (Hierarchical Graph FM index) - Releases · DaehwanKimLab/hisat2.： 。

HISAT2 graph-based alignment of next generation sequencing ...。

We have moved HISAT2 index files to the AWS Public Dataset Program. ... HISAT-genotype moved to http://daehwankimlab.github.io/hisat-genotype/ ...： 。

CIRCexplorer pipelines for circRNA annotation and quantification ...。

2021年2月12日 · Of note, in addition to HISAT2 [51] and TopHat-Fusion [52] that ... CIRCexplorer, TopHat/STAR, https://github.com/YangLab/CIRCexplorer, [39].。

DNAscan: personal computer compatible NGS analysis, annotation ...。

2019年4月27日 · Its code and documentation are available on GitHub: ... Variant calling pipelines based on HISAT2 generally perform poorly on indels [10].。

CirComPara: A Multi-Method Comparative Bioinformatics Pipeline to ...。

2017年2月10日 · Here, we present CirComPara (http://github.com/egaffo/CirComPara), ... For the linear genome mapping step, we chose HISAT2 [34] for its ...。

Systems Medicine: Integrative, Qualitative and Computational ...。

Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and ... Picard, n.d. (http://broadinstitute.github.io/picard/) PT.。

CoGe LoadExp+: A web-based suite that integrates next-generation ...。

RNA‐seq, Cufflinks (Trapnell et al., 2010), https://goo.gl/KCBtbH ... the MIT open source license (source code on GitHub https://github.com/LyonsLab/coge).